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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920645.1_cds_XP_016469718.1_62239
CDS Infomation

[gene=LOC107792059] [db_xref=GeneID:107792059] [protein=protein PHR1-LIKE 1-like isoform X2] [protein_id=XP_016469718.1] [location=complement(join(1894..1955,13229..13268,13368..13444,13529..13739,13875..14480))] [gbkey=CDS]
Sequence

ATGGAAGCACGTCCTGTCGCTGTTCAAAGTGTGGTTGCAAGTCAACTCAGTAATTGTGGT
GCATCAGGGGTACTTTCTTCTTCTTCTTTCCCTATGCTTCCAACAGTCCTAGGAGAGAAG
TATCCTTTGTTGCCAGACTCGCAGCAGGCTTCGACGGAGAAGGAACTCAAGCAACATCCT
GGAACTTTTGTTTCTCATTTGCCTTCCAACAGTGGGGCTGTTGGTCTTATGTTTTCATCA
TCATCAGGATTCTCGGCGGATCTTCATTTCTCATCCGTTCGACCCCAAGAAAATCACTCA
GGACCTGCACCTTTCATTTCTCAGTCAATAAATAGTGAGACATCAATCCTATTACCTCAT
TCTGGAGTTCTTCAATCCACAGCATCTAGCCAATATTTGAATGAAAACAATGAACCCTGG
TGTATAGATCCATTGCCTGATTTCCTTGACTATTCGATGAATACTCCTGTCCAAAATAGT
CAGCTAGCTTGTAGCAATAAACAAAGTGATTGGCAGGAATGGGCGGACCTCGTAATCAAT
GAGGAAGATGCTCTGACTTCTAATTGGAACGAGATCATGGCTGATACAAGCCTTGCCGAG
ACAGAGATGCAATATCAGGAGGAAAAACAACCTTCAAATTTCCCAATGCAGCAAGTCCAA
ACATCACAGCAAATCCCAGCTGTGGCTGTAGAAAATTCAGCTATTGCTCCTGCATCATCC
CCTGCAAGTGGTGCTGCAACAAAGCAACGCATGCGTTGGACACCAGAACTTCATGAAGCC
TTTGTGGAAGCAGTCAACAAGCTTGGTGGAAGTGAAAGAGCTACTCCCAAAGGTGTGCTA
AAATTGATGAAAGTTGAAGGTTTGACCATCTATCATGTAAAAAGTCACTTGCAGAAATAT
CGAACAGCTAGATATAAACCAGAAGCATCAGAGGAGTCTTCAGAGAAGAAACATTCTTCA
ATTGATGATTTGTCATCTCTGGACTTAAAAACGTAA

Peptide Sequence

PEP ID

XP_016469718.1
PEP Infomation

PREDICTED: protein PHR1-LIKE 1-like isoform X2 [Nicotiana tabacum]
Sequence

MEARPVAVQSVVASQLSNCGASGVLSSSSFPMLPTVLGEKYPLLPDSQQASTEKELKQHP
GTFVSHLPSNSGAVGLMFSSSSGFSADLHFSSVRPQENHSGPAPFISQSINSETSILLPH
SGVLQSTASSQYLNENNEPWCIDPLPDFLDYSMNTPVQNSQLACSNKQSDWQEWADLVIN
EEDALTSNWNEIMADTSLAETEMQYQEEKQPSNFPMQQVQTSQQIPAVAVENSAIAPASS
PASGAATKQRMRWTPELHEAFVEAVNKLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKY
RTARYKPEASEESSEKKHSSIDDLSSLDLKT

Transcript Sequence

Gene sequence data has not been registered.